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Chaos-embedded particle swarm optimization approach for protein-ligand docking and virtual screening Journal article
JOURNAL OF CHEMINFORMATICS, 2018,Volume: 10
Authors:  Tai, Hio Kuan;  Jusoh, Siti Azma;  Siu, Shirley W. I.
Favorite  |  View/Download:5/0  |  Submit date:2019/01/17
Docking  Virtual screening  PSOVina  Autodock Vina  Chaotic maps  Singer map  Sinusoidal map  
Adaptive Incremental Genetic Algorithm for Task Scheduling in Cloud Environments Journal article
SYMMETRY-BASEL, 2018,Volume: 10,Issue: 5
Authors:  Duan, Kairong;  Fong, Simon;  Siu, Shirley W. I.;  Song, Wei;  Guan, Steven Sheng-Uei
Favorite  |  View/Download:8/0  |  Submit date:2018/10/30
cloud computing  Infrastructure as a Service  genetic algorithm  task scheduling  
AmPEP: Sequence-based prediction of antimicrobial peptides using distribution patterns of amino acid properties and random forest Journal article
SCIENTIFIC REPORTS, 2018,Volume: 8
Authors:  Bhadra, Pratiti;  Yan, Jielu;  Li, Jinyan;  Fong, Simon;  Siu, Shirley W. I.
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Comparison of Biomolecular Force Fields for Alkanethiol Self-Assembled Monolayer Simulations Journal article
JOURNAL OF PHYSICAL CHEMISTRY C, 2017,Volume: 121,Issue: 47,Page: 26340-26349
Authors:  Bhadra, Pratiti;  Siu, Shirley W. I.
Favorite  |  View/Download:2/0  |  Submit date:2018/10/30
TMDIM: an improved algorithm for the structure prediction of transmembrane domains of bitopic dimers Journal article
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 2017,Volume: 31,Issue: 9,Page: 855-865
Authors:  Cao, Han;  Ng, Marcus C. K.;  Jusoh, Siti Azma;  Tai, Hio Kuan;  Siu, Shirley W. I.
Favorite  |  View/Download:2/0  |  Submit date:2018/10/30
Structure prediction  Bitopic dimer  Helix packing  Helix assembly  Scwrl4  Bioinformatics  
Exploring the behaviour of water nanodroplet on a coplanar electrowetting-on-dielectric: a molecular dynamics approach Journal article
MICRO & NANO LETTERS, 2017,Volume: 12,Issue: 7,Page: 486-489
Authors:  Chan, Hoi Kei;  Mak, Pui In;  Siu, Shirley W. I.
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water  drops  wetting  molecular dynamics method  hydrogen bonds  contact angle  water nanodroplet  coplanar electrowetting-on-dielectric  molecular dynamics simulation  hydrophobic surface  applied electric field  open-plate coplanar electrodes system  electrode-induced field  contact angle  hydrogen bonding  diffusion coefficient  water molecules  hydration layer  water diffusion  
PyMOL mControl: Manipulating molecular visualization with mobile devices Journal article
BIOCHEMISTRY AND MOLECULAR BIOLOGY EDUCATION, 2017,Volume: 45,Issue: 1,Page: 76-83
Authors:  Lam, Wendy W. T.;  Siu, Shirley W. I.
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Gesture-based and touch-based interface  molecular visualization  mobile device  PyMOL  
Real-time analysis of vital signs using incremental data stream mining techniques with a case study of ARDS under ICU treatment Journal article
Journal of Medical Imaging and Health Informatics, 2015,Volume: 5,Issue: 5,Page: 1108-1115
Authors:  Fong, Simon;  Siu, Shirley W. I.;  Zhou, Suzy;  Chan, Jonathan H.;  Mohammed, Sabah;  Fiaidhi, Jinan
Favorite  |  View/Download:4/0  |  Submit date:2019/02/13
Data Stream Mining  Naïve Bayes  Optimized Very Fast Decision Tree  Support Vector Machine  Vital Signs Analysis  
PSOVina: The hybrid particle swarm optimization algorithm for protein–ligand docking Conference paper
Journal of Bioinformatics and Computational Biology, Nanyang Technological University, Singapore, SINGAPORE, NOV 10-12, 2014
Authors:  Marcus C. K. Ng;  Simon Fong;  Shirley W. I. Siu
Favorite  |  View/Download:2/0  |  Submit date:2019/02/13
Autodock  Conformational Search  Drug Design  Flexible Docking  Particle Swarm Optimization  Protein-ligand Docking  
Efficient variation-based feature selection for medical data classification Journal article
Journal of Medical Imaging and Health Informatics, 2015,Volume: 5,Issue: 5,Page: 1093-1098
Authors:  Fong, Simon;  Liang, Justin;  Siu, Shirley W. I.;  Chan, Jonathan H
Favorite  |  View/Download:5/0  |  Submit date:2019/02/13
Classification  Feature Selection  Medical Datasets