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Chaos-embedded particle swarm optimization approach for protein-ligand docking and virtual screening Journal article
JOURNAL OF CHEMINFORMATICS, 2018,Volume: 10
Authors:  Tai, Hio Kuan;  Jusoh, Siti Azma;  Siu, Shirley W. I.
Favorite  |  View/Download:5/0  |  Submit date:2019/01/17
Docking  Virtual screening  PSOVina  Autodock Vina  Chaotic maps  Singer map  Sinusoidal map  
Novel Kunitz-like Peptides Discovered in the Zoanthid Palythoa caribaeorum through Transcriptome Sequencing Journal article
JOURNAL OF PROTEOME RESEARCH, 2018,Volume: 17,Issue: 2,Page: 891-902
Authors:  Liao, Qiwen;  Li, Shengnan;  Siu, Shirley Weng In;  Yang, Binrui;  Huang, Chen;  Chan, Judy Yuet-Wa;  Morlighem, Jean-Etienne R. L.;  Wong, Clarence Tsun Ting;  Radis-Baptista, Gandhi;  Lee, Simon Ming-Yuen
Favorite  |  View/Download:9/0  |  Submit date:2018/10/30
soft coral  Transcriptome  Kunitz-like peptides  protein docking zebrafish  neurotoxin  zoanthids  
TMDIM: an improved algorithm for the structure prediction of transmembrane domains of bitopic dimers Journal article
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, 2017,Volume: 31,Issue: 9,Page: 855-865
Authors:  Cao, Han;  Ng, Marcus C. K.;  Jusoh, Siti Azma;  Tai, Hio Kuan;  Siu, Shirley W. I.
Favorite  |  View/Download:2/0  |  Submit date:2018/10/30
Structure prediction  Bitopic dimer  Helix packing  Helix assembly  Scwrl4  Bioinformatics  
A 3D microblade structure for precise and parallel droplet splitting on digital microfluidic chips Journal article
LAB ON A CHIP, 2017,Volume: 17,Issue: 5,Page: 896-904
Authors:  Dong, Cheng;  Jia, Yanwei;  Gao, Jie;  Chen, Tianlan;  Mak, Pui-In;  Vai, Mang-I;  Martins, Rui P.
Favorite  |  View/Download:14/0  |  Submit date:2018/10/30
A Fractal Dimension and Wavelet Transform Based Method for Protein Sequence Similarity Analysis Journal article
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2015,Volume: 12,Issue: 2,Page: 348-359
Authors:  Lina Yang;  Yuan Yan Tang;  Yang Lu;  Huiwu Luo
Favorite  |  View/Download:2/0  |  Submit date:2019/02/11
Discrete Wavelet Transform  Fractal Dimension  Higuchi's Algorithm  Protein Sequence Similarity  Sliding Window  
Similarity Analysis based on Sparse Representation for Protein Sequence Comparison Conference paper
Proceedings - 2015 IEEE 2nd International Conference on Cybernetics, CYBCONF 2015, Gdynia, Poland, 24-26 June 2015
Authors:  Lina Yang;  Yuan Yan Tang;  Yulong Wang;  Huiwu Luo;  Jianjia Pan;  Haoliang Yuan;  Xianwei Zheng;  Chunli Li;  Ting Shu
Favorite  |  View/Download:4/0  |  Submit date:2019/02/11
Feature Extraction  L1-regularized Least Squares  Protein Sequence Analysis  Sparse Representation  
A Novel Method for Protein Structure Retrieval Using Tableau Representation and Sparse Coding Conference paper
Conference Proceedings - IEEE International Conference on Systems, Man and Cybernetics, San Diego, CA, 5-8 Oct. 2014
Authors:  Yang Lu;  Lina Yang;  Haoliang Yuan;  Yulong Wang;  Huiwu Luo;  Yuan Yan Tang
Favorite  |  View/Download:2/0  |  Submit date:2019/02/11
Comparison of Cutoff Strategies for Geometrical Features in Machine Learning-Based Scoring Functions Conference paper
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Hangzhou, China, 14-16 December,2013
Authors:  Shirley W.I. Siu;  Thomas K.F. Wong;  Simon Fong
Favorite  |  View/Download:6/0  |  Submit date:2019/02/13
Geometrical Features  Machine Learning  Protein-ligand Binding Affinity  Scoring Function  Structure-based Drug Design  
Automatic Peak Selection by a Benjamini-Hochberg-Based Algorithm Journal article
PLoS ONE, 2013,Volume: 8,Issue: 1
Authors:  Abbas A.;  Kong X.-B.;  Liu Z.;  Jing B.-Y.;  Gao X.
Favorite  |  View/Download:5/0  |  Submit date:2019/02/14